yxkF [2019-02-19 20:12:14]

unknown

locus: BSU38820

pI: 5.33

mw: 34.67 kDa

protein length: 297 aa

gene length: 894 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,985,351 3,986,244

Expression and Regulation

Operons

• genes: [gene|9EE268C3DC3C0F2F846DAEB2004222B6F841B9EA|yxkF]-[gene|434F6C546F783503A82D390FD238F05025FC1802|msmX]
  description: [Pubmed|10746760]

  regulatory mechanism

  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, [Pubmed|10666464], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]

  regulation

  • repressed by glucose ([protein|search|CcpA]) [Pubmed|10666464]

Biological materials

Mutant

• MGNA-B740 (yxkF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1739 NBRP B. subtilis, Japan]
• GP1117 (spc), available in [SW|Stlke] lab
• BKE38820 ([gene|9EE268C3DC3C0F2F846DAEB2004222B6F841B9EA|yxkF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAGTCTCCTCTCTTAT, downstream forward: _UP4_TAAATTGGAAATATGCACGA
• BKK38820 ([gene|9EE268C3DC3C0F2F846DAEB2004222B6F841B9EA|yxkF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAGTCTCCTCTCTTAT, downstream forward: _UP4_TAAATTGGAAATATGCACGA

References

• 16672620